PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG043180.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 464aa MW: 50359.4 Da PI: 6.092

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG043180.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.4	2.6e-13	234	285	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e+I++L+ TRIDC1AG043180.1 234 QRMTHIAVERNRRRQMNDYLRVLRSLMPGS---YVQRGDQASIIGGAIEFIRELE 285 79**************************...9****************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MHALAVRLSK LRRRDHGKTG TCMHRSRTAW PCMADQFRMC LLVTMRGRSE QGSSHQLDTF 60 AQLDGGAAPE EPIGGGAAAE MADYMLGQTT PLPPGGPHGQ VSLDKLSFSD VLQFADFGPR 120 LALNQPSADH DDARDDDEED SYFFRFQSQL SGSDDPDPRG GAGILHAAEH EGSKTADGSG 180 GPHDHGCGVS ESTTLVQQSD GGGRVGQKAG GEQAKSGRRK RPRSTKTSEE VESQRMTHIA 240 VERNRRRQMN DYLRVLRSLM PGSYVQRGDQ ASIIGGAIEF IRELEQLIQC LESQKRRRLY 300 GDTPRPVADA SAPVVPATSI HEPPPQGHEA APFYVSPSLS FPGAGNGDGA AGAKVMIDLD 360 ACGGGLREEV AENKSSLADI EVRVLGEDAV IKVLSRRRPE QLIKTIAVLE EMHMSILHTN 420 ITTIEQTVLY SFNVKITSEP RFTAEEIVGA VHQILSFIDV NYTL

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MHALAVRLSK LRRRDHGKTG TCMHRSRTAW PCMADQFRMC LLVTMRGRSE QGSSHQLDTF  60
AQLDGGAAPE EPIGGGAAAE MADYMLGQTT PLPPGGPHGQ VSLDKLSFSD VLQFADFGPR  120
LALNQPSADH DDARDDDEED SYFFRFQSQL SGSDDPDPRG GAGILHAAEH EGSKTADGSG  180
GPHDHGCGVS ESTTLVQQSD GGGRVGQKAG GEQAKSGRRK RPRSTKTSEE VESQRMTHIA  240
VERNRRRQMN DYLRVLRSLM PGSYVQRGDQ ASIIGGAIEF IRELEQLIQC LESQKRRRLY  300
GDTPRPVADA SAPVVPATSI HEPPPQGHEA APFYVSPSLS FPGAGNGDGA AGAKVMIDLD  360
ACGGGLREEV AENKSSLADI EVRVLGEDAV IKVLSRRRPE QLIKTIAVLE EMHMSILHTN  420
ITTIEQTVLY SFNVKITSEP RFTAEEIVGA VHQILSFIDV NYTL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	235	246	RMTHIAVERNRR
2	295	299	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	1e-105	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG043180.1