PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG044270.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 505aa MW: 54416.5 Da PI: 5.6719

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG044270.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.5	4.9e-32	179	236	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK++kgse+prsYY+C++agCp+kkkve++ d++v+ei+Y+g+Hnh+k TRIDC1AG044270.3 179 DDGYNWRKYGQKQMKGSENPRSYYKCSFAGCPTKKKVEQAP-DGQVTEIVYKGTHNHPK 236 8**************************************.*************85 PP
2	WRKY	106.7	1.2e-33	343	401	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+++Cpv+k+ver+++d ++v++tYeg+Hnh+ TRIDC1AG044270.3 343 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTPNCPVRKHVERASQDLRAVVTTYEGKHNHD 401 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MAMTPPSSFP PASPSSYFNM SSGFLDSPVL LTPSLFASPT TGAFPSHQFN WMGTPENDGL 60 QGSTSQDEQR QYSGFTFQTT APLPAVTTTT ASSFLQSSMP MAQLVGDSYE QQQQPWSYQD 120 TGMNGGARPA EFTTQFEPPT TSTIMATTAP DVLGNGAYSV PVPSGTAGYR VQSRQPSSDD 180 GYNWRKYGQK QMKGSENPRS YYKCSFAGCP TKKKVEQAPD GQVTEIVYKG THNHPKPQNP 240 RRGSGSAVSS SYALQCHGAN DASSDALSGT PENSSASYGE DETNGVSSRL AGAVGGGDDQ 300 FDDEEPDCKR WRSDGEATIM GVGNRTVREP RVVVQTMSDI DILDDGYRWR KYGQKVVKGN 360 PNPRSYYKCT TPNCPVRKHV ERASQDLRAV VTTYEGKHNH DVPAARGSAA AAARYRAATL 420 QPAASYLQGA GGYSSLRPDG FGGVDGGGAP AEMSGFALSG FGNPSYSYPS MQEQQQQQSD 480 AMYYDASRTK DEPRDDMFFG HSSMF

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MAMTPPSSFP PASPSSYFNM SSGFLDSPVL LTPSLFASPT TGAFPSHQFN WMGTPENDGL  60
QGSTSQDEQR QYSGFTFQTT APLPAVTTTT ASSFLQSSMP MAQLVGDSYE QQQQPWSYQD  120
TGMNGGARPA EFTTQFEPPT TSTIMATTAP DVLGNGAYSV PVPSGTAGYR VQSRQPSSDD  180
GYNWRKYGQK QMKGSENPRS YYKCSFAGCP TKKKVEQAPD GQVTEIVYKG THNHPKPQNP  240
RRGSGSAVSS SYALQCHGAN DASSDALSGT PENSSASYGE DETNGVSSRL AGAVGGGDDQ  300
FDDEEPDCKR WRSDGEATIM GVGNRTVREP RVVVQTMSDI DILDDGYRWR KYGQKVVKGN  360
PNPRSYYKCT TPNCPVRKHV ERASQDLRAV VTTYEGKHNH DVPAARGSAA AAARYRAATL  420
QPAASYLQGA GGYSSLRPDG FGGVDGGGAP AEMSGFALSG FGNPSYSYPS MQEQQQQQSD  480
AMYYDASRTK DEPRDDMFFG HSSMF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	4e-89	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG044270.3