PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG044920.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 255aa    MW: 28754 Da    PI: 7.0647
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG044920.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.55.8e-19111200198
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       f+k++++s+v++  +l lp +f+++h  ++ ++ +++lede+g +++  +   +++ +  l++GW++F   ++L++gD++vF+l + ++f  +
  TRIDC1AG044920.6 111 FVKTMVRSHVSSCFWLGLPSSFCKDHL-PP-REHKMVLEDEEGVEFDAVY--IGNRTG--LSGGWRGFSMHHDLEDGDSLVFELAEPDRF--K 195
                       89*********************9994.44.4459***************..555444..***********************9876777..7 PP

                       EEEE- CS
                B3  94 vkvfr 98 
                       + +f+
  TRIDC1AG044920.6 196 IYIFK 200
                       77776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
AAADDLGISK MAKSLIQATR QQDKTPRASP KSRKKFEATT EVRRSSRART TVSYKDDFPE  60
LDDFVRRRRI SKSVDNGRGY TGRISSYQQQ QRAFKRAEKL QDSLDPDNPS FVKTMVRSHV  120
SSCFWLGLPS SFCKDHLPPR EHKMVLEDEE GVEFDAVYIG NRTGLSGGWR GFSMHHDLED  180
GDSLVFELAE PDRFKIYIFK AIEDGKEAEP NDKNTDVDSD SAQEVPDQTD SPVSEPPSSP  240
EPLKGAKRRK LPSSP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1243249LKGAKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.15e-44B3 family protein