PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG045760.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 421aa MW: 46318.6 Da PI: 4.739

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG045760.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.8	1.2e-13	1	45	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+ Ed +l +vk++G +W+ + + g+ R++k+c++rw ++l TRIDC1AG045760.7 1 WTPAEDAILEAYVKKHGVQNWNVVQKDTGLLRCGKSCRLRWANHL 45 ***************************99********9986 PP
2	Myb_DNA-binding	49.9	7.3e-16	51	94	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g +T+eE+ l+++++ ++G++ W++ a++++ gRt++++k++w++ TRIDC1AG045760.7 51 KGTFTKEEENLIIKLHSKMGNK-WARMAARLP-GRTDNEIKNYWNT 94 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
WTPAEDAILE AYVKKHGVQN WNVVQKDTGL LRCGKSCRLR WANHLRPDLK KGTFTKEEEN 60 LIIKLHSKMG NKWARMAARL PGRTDNEIKN YWNTRIKKCQ RTSTPIYPAE ICLQASNEDQ 120 HESADFSFSE KLANDLLHGN GLYDPSSTWG DFIDDQEALS YAPQLPDVSF SNLPGLYFES 180 TNHGFVDQVN QAEVLKESEI SFPWLNAAIN GTFDGSHAFS NGNFSTSRPM TGPWKMELPS 240 FQFAGSDPNN WSAYSRTCAA QGANFADPCM RSSAAMASAK FEHMCMIPGN SGQLEEPLPE 300 AHAVSSAENQ QLSVGSSSAS TGSPCDAMVE TSELHFLERD PNLYALVNSC SPASPLCQAS 360 PDELPCSDFS SALISLAAAS PVFVSDEPTI LQYEKGFLLP HPEDSGADAF SHWNAMPPIF 420 Q

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

WTPAEDAILE AYVKKHGVQN WNVVQKDTGL LRCGKSCRLR WANHLRPDLK KGTFTKEEEN  60
LIIKLHSKMG NKWARMAARL PGRTDNEIKN YWNTRIKKCQ RTSTPIYPAE ICLQASNEDQ  120
HESADFSFSE KLANDLLHGN GLYDPSSTWG DFIDDQEALS YAPQLPDVSF SNLPGLYFES  180
TNHGFVDQVN QAEVLKESEI SFPWLNAAIN GTFDGSHAFS NGNFSTSRPM TGPWKMELPS  240
FQFAGSDPNN WSAYSRTCAA QGANFADPCM RSSAAMASAK FEHMCMIPGN SGQLEEPLPE  300
AHAVSSAENQ QLSVGSSSAS TGSPCDAMVE TSELHFLERD PNLYALVNSC SPASPLCQAS  360
PDELPCSDFS SALISLAAAS PVFVSDEPTI LQYEKGFLLP HPEDSGADAF SHWNAMPPIF  420
Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.1	4e-59	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG045760.7