PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG046230.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 139aa    MW: 15829.5 Da    PI: 11.5386
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG046230.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF59.83.2e-191057249
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                      rienk  r + fskRr+g++ KA+EL v+C+a+va +++s  gk y +
  TRIDC1AG046230.1 10 RIENKAARDICFSKRRQGLFHKANELAVMCGAQVAAVVYSRAGKAYSF 57
                      8*******************************************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MGRKKIVIRR IENKAARDIC FSKRRQGLFH KANELAVMCG AQVAAVVYSR AGKAYSFGHP  60
SAECWRHLSL QRRSFFYLEL PLTTLFSLSH NSLVFSLKNS LMNTHTRTHI PRKRNGFARD  120
TPLVNHNGYM VSLLSPLGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10140.23e-19MIKC_MADS family protein