PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG047600.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 309aa    MW: 32862.9 Da    PI: 12.0392
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG047600.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS151.95.8e-47352212185
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalkl..fsevsPil 91 
                       ++lLl+cA a++s+d +laq++++ l+++as +gdp+qRl++ ++++L ar  r  +s  ++++ p ++    s++++++++l  +++++P++
  TRIDC1AG047600.1  35 QQLLLHCAAALESNDVTLAQQAMWVLNNIASAQGDPNQRLTSSLLRGLVARACRtCGSPRADSMGPPPALG--SQRAMSVTELadYVDLTPWH 125
                       699***************************************************54555566664444432..555555555577******** PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl 181
                       +f++ + N aIl+av+g ++vH++D++++ ++QWp+L++aL++Rp+gpp lRiT+     +g        ee+g rLa+fA++ gv++efnv+
  TRIDC1AG047600.1 126 RFGFTASNGAILRAVAGRDAVHVVDLGVTRCMQWPTLIDALSKRPGGPPALRITVPPVRPAGpplLGVPDEEIGLRLANFAKSKGVRLEFNVV 218
                       ******************************************************97775555777777889********************96 PP

              GRAS 182 vakr 185
                         kr
  TRIDC1AG047600.1 219 -NKR 221
                       .443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
RGHLGMEQEL RSGGAVRAQS TLCFSGALVD GPRIQQLLLH CAAALESNDV TLAQQAMWVL  60
NNIASAQGDP NQRLTSSLLR GLVARACRTC GSPRADSMGP PPALGSQRAM SVTELADYVD  120
LTPWHRFGFT ASNGAILRAV AGRDAVHVVD LGVTRCMQWP TLIDALSKRP GGPPALRITV  180
PPVRPAGPPL LGVPDEEIGL RLANFAKSKG VRLEFNVVNK RARLRPLRPA GAAAKRRRGA  240
RGELPELAPA RGAGLEGRLR GRGPGAGPVP GHRDRRGRRP GLAEPGHAHR GLLQLPLDPL  300
RRARHVGAQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.16e-57GRAS family protein