PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG047600.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 417aa    MW: 44612.7 Da    PI: 6.4209
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG047600.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS266.11.2e-81324142373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalkl..fsevsPil 91 
                       ++lLl+cA a++s+d +laq++++ l+++as +gdp+qRl++ ++++L ar  r  +s  ++++ p ++    s++++++++l  +++++P++
  TRIDC1AG047600.2  32 QQLLLHCAAALESNDVTLAQQAMWVLNNIASAQGDPNQRLTSSLLRGLVARACRtCGSPRADSMGPPPALG--SQRAMSVTELadYVDLTPWH 122
                       699***************************************************54555566664444432..555555555577******** PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl 181
                       +f++ + N aIl+av+g ++vH++D++++ ++QWp+L++aL++Rp+gpp lRiT+     +g        ee+g rLa+fA++ gv++efnv+
  TRIDC1AG047600.2 123 RFGFTASNGAILRAVAGRDAVHVVDLGVTRCMQWPTLIDALSKRPGGPPALRITVPPVRPAGpplLGVPDEEIGLRLANFAKSKGVRLEFNVV 215
                       ******************************************************97775555777777889*********************9 PP

              GRAS 182 ................vakrledl..eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFler 256
                                       ++++l+++  ++ +Lr++ gEal+Vn++  l ++       +  rd ++++v+ l P +v+v++++ad++s+s+++r
  TRIDC1AG047600.2 216 nkstatsspsptklqtLCQELACVlsDPPALRLRDGEALVVNCQSWLRHVA------PGSRDGFVDAVRALDPCLVTVTDEDADLDSPSLATR 302
                       88888777777666655555555566788889999************9998......445778****************************** PP

              GRAS 257 flealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgy 349
                       ++ ++++++ lfd+l++++p++s  r   E++ +g++i++vv + g+e   r e+ ++  er+++ GF  v ++e++++++++ll++++  g+
  TRIDC1AG047600.2 303 IAGCFNFHWILFDALDTSAPSDSPRRLEHEAA-VGQKIESVVGADGTE---RSESGARLAERMRRKGFAGVGFGEDEVAEVRHLLSEHA-TGW 390
                       ******************************99.**************9...6777778889****************************.99* PP

              GRAS 350 rveeesgslvlgWkdrpLvsvSaW 373
                        v+ e++ lvl+Wk+++ v+++aW
  TRIDC1AG047600.2 391 GVKREEDMLVLTWKGHAAVFTTAW 414
                       ************************ PP
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    
LGMEQELRSG GAVRAQSTLC FSGALVDGPR IQQLLLHCAA ALESNDVTLA QQAMWVLNNI  60
ASAQGDPNQR LTSSLLRGLV ARACRTCGSP RADSMGPPPA LGSQRAMSVT ELADYVDLTP  120
WHRFGFTASN GAILRAVAGR DAVHVVDLGV TRCMQWPTLI DALSKRPGGP PALRITVPPV  180
RPAGPPLLGV PDEEIGLRLA NFAKSKGVRL EFNVVNKSTA TSSPSPTKLQ TLCQELACVL  240
SDPPALRLRD GEALVVNCQS WLRHVAPGSR DGFVDAVRAL DPCLVTVTDE DADLDSPSLA  300
TRIAGCFNFH WILFDALDTS APSDSPRRLE HEAAVGQKIE SVVGADGTER SESGARLAER  360
MRRKGFAGVG FGEDEVAEVR HLLSEHATGW GVKREEDMLV LTWKGHAAVF TTAWAPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-107GRAS family protein