PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG047650.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 192aa MW: 20688.4 Da PI: 9.2388

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG047650.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.2	0.00072	84	118	15	54
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ ++ L++l+ + +K + a++L +A+ YIk L TRIDC1AG047650.3 84 KLGDRVTALQQLVSPF-----GKTDTASVLHEAIGYIKFL 118 5556666777777776.....8****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence
HHQFPDFFSS TGLFGAPAPI QRSPQPLLQA LEPKLLKSRT EPAAQDACSS SSATRRSSAA 60 PPAAKKPRTE TPSPMPTFKV RKEKLGDRVT ALQQLVSPFG KTDTASVLHE AIGYIKFLHD 120 QVASLSSPYF IRCSGGPVQL QHKQGSDGDA GEAKEDLRSR GLCLVPVAST YTMASETAAP 180 EFWHPTFGGT FH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.3	1e-41	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG047650.3