PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG048550.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 318aa MW: 36129.7 Da PI: 8.3763

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG048550.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	45.5	1.5e-14	23	61	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+C Ckks+Clk+YC Cfa g +Cse+C C C+Nk++ TRIDC1AG048550.1 23 CKHCACKKSRCLKLYCPCFAGGGYCSEKCGCVPCFNKSD 61 89**********************************975 PP
2	TCR	49.7	7.1e-16	108	144	3	39
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++gCnCkks+ClkkYC+C+++g+ Cs C+CedCkN TRIDC1AG048550.1 108 RRGCNCKKSSCLKKYCDCYQDGTGCSLFCRCEDCKNP 144 589*********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
HEPARARHHA QERQKLEDAA DGCKHCACKK SRCLKLYCPC FAGGGYCSEK CGCVPCFNKS 60 DFAETVQTTR KVLLSRQKRM SLKINRRLEA NAETMEDAHN SSSSTPPRRG CNCKKSSCLK 120 KYCDCYQDGT GCSLFCRCED CKNPYGKNEG FMADESKRFI YTGADLDHSE DEHDFVVERS 180 PRLQSPISKE SSFQHTPPRS KASSRDTHLL PQVLSQWQPR SWQLSSKRQG NDHRVVDDSG 240 ENHKSSSHEW QLAKHQVQED AYSISRCVQI LNGMVELSQV EKSVAPDVFL QPGNREIFVS 300 LGLDVRALWL KRKIQHLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22760.1	7e-42	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG048550.1