PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG048550.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 239aa MW: 27257.5 Da PI: 7.7201

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG048550.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.3	4.7e-16	29	65	3	39
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++gCnCkks+ClkkYC+C+++g+ Cs C+CedCkN TRIDC1AG048550.5 29 RRGCNCKKSSCLKKYCDCYQDGTGCSLFCRCEDCKNP 65 589*********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MSLKINRRLE ANAETMEDAH NSSSSTPPRR GCNCKKSSCL KKYCDCYQDG TGCSLFCRCE 60 DCKNPYGKNE GFMADESKRF IYTGADLDHS EDEHDFVVER SPRLQSPISK ESSFQHTPPR 120 SKASSRDTHL LPQVLSQWQP RSWQLSSKRQ GNDHRVVDDS GENHKSSSHE WQLAKHQVQE 180 DAYSISRCVQ ILNGMVELSQ VEKSVAPDVF LQPGNREIFV SLGLDVRALW LKRKIQHLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22760.1	8e-21	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG048550.5