PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG048550.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 141aa MW: 15833.1 Da PI: 8.0868

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG048550.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	25.1	3.5e-08	4	32	13	41
TCR 13 ClkkYCeCfaagkkCseeCkCedCkNkee 41 C+ +YC Cfa g +Cse+C C C+Nk++ TRIDC1AG048550.8 4 CVCRYCPCFAGGGYCSEKCGCVPCFNKSD 32 999***********************975 PP
2	TCR	51.6	1.9e-16	79	115	3	39
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++gCnCkks+ClkkYC+C+++g+ Cs C+CedCkN TRIDC1AG048550.8 79 RRGCNCKKSSCLKKYCDCYQDGTGCSLFCRCEDCKNP 115 589*********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 141 aa Download sequence
MIICVCRYCP CFAGGGYCSE KCGCVPCFNK SDFAETVQTT RKVLLSRQKR MSLKINRRLE 60 ANAETMEDAH NSSSSTPPRR GCNCKKSSCL KKYCDCYQDG TGCSLFCRCE DCKNPYGKNE 120 GFMADESKRF IYTGADLDHS E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	2e-32	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG048550.8