PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG048820.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 719aa MW: 82764.4 Da PI: 6.8744

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG048820.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51.7	3e-16	117	198	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+++A +GF vr+ +++++ +k ++ C+++gk +++++ k++r+++ C+ak+ vk++ +++we + +++eHnH+l+p TRIDC1AG048820.2 117 RFYSTHAMLTGFAVRRGSNYRR------VKFDLECNRSGKLKPTEDL--KRKRRSNALGSRCQAKVIVKLH-NEQWEFIGVKHEHNHPLCP 198 5******************9......7889*******9988..555555566789*****9.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 719 aa Download sequence
MPGGGLQLTG GNDQEHASNG IGTAAQGLLA DISDKQSNSV DPGMQQHAEE QDQLHGVTQG 60 HEMSSNDTSS GSDSGSSSGS ELDTELGKCF YPSFEELENS RPPEIGMRFP TLEDAERFYS 120 THAMLTGFAV RRGSNYRRVK FDLECNRSGK LKPTEDLKRK RRSNALGSRC QAKVIVKLHN 180 EQWEFIGVKH EHNHPLCPSP SLASFFLNHK YLSSEEKLFL RVLQQSRVNP RKAMNIFRRM 240 RSNFGKVSSI KEKDTSNSQC VNQWRKENSD VETALKRFKE LELRNLGFSY TMQKDEDNIV 300 RSLFWTDARS NVDYEIFGDF ISFNTTYSTN RHNMTFTPII GMNNHGRILV FGCALLQDQK 360 AETFKWMFQT FLHVMGGKLP RIVITDQDEG MATAISEVMP QVRHRFCKFS VMRKAQEILG 420 AFMAARGNIN AELHDLVDNS LTEKEFEEGW DFLTERYDAS ENEYLRLMWE TRKNWVPVYF 480 QADFCPFVES AGYFEGTNLL FKDNVLPKDR IEKFIEQYER MQEHIVKTEE EDALQSATEP 540 AYFSMQPIEK HAARIYTRQI FLRAQNELYY STAFNVHEIQ GGHRLEKVFN YENPEFSRNS 600 FEVLAEPGTH AFKCQCAKFT RDGILCCHIF RVFTQLGVKE IPAQYMLPRW APKFIEERLK 660 EYEERCSKRT ENKTRYAMLL GKMAEIGKGI CADGAKSGCF MLELDKVQET FRSDGGRKS

Sequence ? help Back to Top

Protein Sequence Length: 719 aa Download sequence

MPGGGLQLTG GNDQEHASNG IGTAAQGLLA DISDKQSNSV DPGMQQHAEE QDQLHGVTQG  60
HEMSSNDTSS GSDSGSSSGS ELDTELGKCF YPSFEELENS RPPEIGMRFP TLEDAERFYS  120
THAMLTGFAV RRGSNYRRVK FDLECNRSGK LKPTEDLKRK RRSNALGSRC QAKVIVKLHN  180
EQWEFIGVKH EHNHPLCPSP SLASFFLNHK YLSSEEKLFL RVLQQSRVNP RKAMNIFRRM  240
RSNFGKVSSI KEKDTSNSQC VNQWRKENSD VETALKRFKE LELRNLGFSY TMQKDEDNIV  300
RSLFWTDARS NVDYEIFGDF ISFNTTYSTN RHNMTFTPII GMNNHGRILV FGCALLQDQK  360
AETFKWMFQT FLHVMGGKLP RIVITDQDEG MATAISEVMP QVRHRFCKFS VMRKAQEILG  420
AFMAARGNIN AELHDLVDNS LTEKEFEEGW DFLTERYDAS ENEYLRLMWE TRKNWVPVYF  480
QADFCPFVES AGYFEGTNLL FKDNVLPKDR IEKFIEQYER MQEHIVKTEE EDALQSATEP  540
AYFSMQPIEK HAARIYTRQI FLRAQNELYY STAFNVHEIQ GGHRLEKVFN YENPEFSRNS  600
FEVLAEPGTH AFKCQCAKFT RDGILCCHIF RVFTQLGVKE IPAQYMLPRW APKFIEERLK  660
EYEERCSKRT ENKTRYAMLL GKMAEIGKGI CADGAKSGCF MLELDKVQET FRSDGGRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-75	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG048820.2