PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG048850.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 721aa MW: 82470.5 Da PI: 6.1947

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG048850.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	37.6	7.4e-12	113	194	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +Y+++A GF + + + +k + C+++ k +++++ +++r+ ++++ +C+a+ +vk +g+we t++++eHnH+l+p TRIDC1AG048850.1 113 YYSAHALLSGFVAIRGPNFMR------KKFHVECNRSRKLAPSQDL-KRKREVYSVNKAQCEARAVVKPV-KGQWEFTSVRSEHNHPLCP 194 8999*****9999988777......456799*****9988.99999************99.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 721 aa Download sequence
MDGYAIISSD QEQPVIGADW SSGALSDELE IHANSADLSL QLAEEQSQLH DILAISEMPI 60 NDTGSGSDSD GSSGNETDKE PGKYYYPGFE ELVNPRPPEV GMRFPTLEDA TRYYSAHALL 120 SGFVAIRGPN FMRKKFHVEC NRSRKLAPSQ DLKRKREVYS VNKAQCEARA VVKPVKGQWE 180 FTSVRSEHNH PLCPSPSLTK FFLSCKHMSA EEKSFLRALQ QSSIHPKKAM KIFKRMRGIL 240 GSLPFNTKDA NTSQCAEQQG KPNSDVETTV KHLKELELQN PCVSITMQTD EDSIVRSLFW 300 TDARSRLDYE IFGDVLSFDT TYSTISHNML FTSISGMNEH GRTLVFGYAL LQDRKAETFK 360 WMFQTFLHVM GGKMPRAIIT DQDEAIAKAI SEVMPQVKLR FCKFHVMRKA REKLGGFIAA 420 RGDINSELHA LVNNSLTETE FEEGWAALIE RYSASGNEYL QLLWETRKEW VPVYFKEDFY 480 PFVEMTGCCE GSNLLFRDYV LPKDRIEKFL ERYEDVQERI LETDDEDRLQ SRTEPSCFSM 540 QPIEKHAARI YTRQIFLKVQ RELLHSTAFN VQEIQMGTVY RLEKVSAYEN PEFDRNSFEL 600 LVEPSTNAIK CECAKFTRDG IPCCHIFRLF TQFGVNEIPG QYIVPRWTAK FKEEQMKQYR 660 EKCLDSRGTD QSENTMRYAM LLSKVADIGK EICGDGSKCD KFRLELEAIQ GKTGNGGMRN 720 T

Sequence ? help Back to Top

Protein Sequence Length: 721 aa Download sequence

MDGYAIISSD QEQPVIGADW SSGALSDELE IHANSADLSL QLAEEQSQLH DILAISEMPI  60
NDTGSGSDSD GSSGNETDKE PGKYYYPGFE ELVNPRPPEV GMRFPTLEDA TRYYSAHALL  120
SGFVAIRGPN FMRKKFHVEC NRSRKLAPSQ DLKRKREVYS VNKAQCEARA VVKPVKGQWE  180
FTSVRSEHNH PLCPSPSLTK FFLSCKHMSA EEKSFLRALQ QSSIHPKKAM KIFKRMRGIL  240
GSLPFNTKDA NTSQCAEQQG KPNSDVETTV KHLKELELQN PCVSITMQTD EDSIVRSLFW  300
TDARSRLDYE IFGDVLSFDT TYSTISHNML FTSISGMNEH GRTLVFGYAL LQDRKAETFK  360
WMFQTFLHVM GGKMPRAIIT DQDEAIAKAI SEVMPQVKLR FCKFHVMRKA REKLGGFIAA  420
RGDINSELHA LVNNSLTETE FEEGWAALIE RYSASGNEYL QLLWETRKEW VPVYFKEDFY  480
PFVEMTGCCE GSNLLFRDYV LPKDRIEKFL ERYEDVQERI LETDDEDRLQ SRTEPSCFSM  540
QPIEKHAARI YTRQIFLKVQ RELLHSTAFN VQEIQMGTVY RLEKVSAYEN PEFDRNSFEL  600
LVEPSTNAIK CECAKFTRDG IPCCHIFRLF TQFGVNEIPG QYIVPRWTAK FKEEQMKQYR  660
EKCLDSRGTD QSENTMRYAM LLSKVADIGK EICGDGSKCD KFRLELEAIQ GKTGNGGMRN  720
T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-79	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG048850.1