PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG049430.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 306aa MW: 32939.8 Da PI: 7.2716

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG049430.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	100.1	3.9e-31	50	165	3	115
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg....... 88 g+kdrhsk+ T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl++a+++i++l+ ++++++ + sa++++++ TRIDC1AG049430.1 50 GGKDRHSKVRTVKGLRDRRVRLSVPTAIQLYDLQDRLGLSQPSKVVDWLLNAAQHEIDKLPPLQFPPHDDD----LLLSAHHHHHHlqptssm 138 78******************************************************************333....333333333333333211 PP TCP 89 kaaksaakskksqksaasalnlakesr 115 +++ ++ +++++ aas+ ++ ++ TRIDC1AG049430.1 139 TSMAMVPPFSHATAAAASMMVVDSDKA 165 333333333333333333333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MISAGDHGND RRKFEPAAAG NKALQAAAAA SRHWSASTES RIVRVSRVFG GKDRHSKVRT 60 VKGLRDRRVR LSVPTAIQLY DLQDRLGLSQ PSKVVDWLLN AAQHEIDKLP PLQFPPHDDD 120 LLLSAHHHHH HLQPTSSMTS MAMVPPFSHA TAAAASMMVV DSDKAAQAHD GGGDLKGFMS 180 LSNSLGLVNG AGASMPTLAA AQAGSYHHHY AAHEAWSNGG NNVQEQLGGH RSSPHVVPHH 240 GLPFPSLLSL APVSQFVFYT PEGGFAMKDV ASDDQFPVDN LDDSQGQLSL SSRGEAFFTQ 300 EARVDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	6e-41	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG049430.1