PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG049430.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family TCP
Protein Properties Length: 268aa    MW: 29034.5 Da    PI: 6.9475
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG049430.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP100.52.9e-31121273115
               TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg....... 88 
                       g+kdrhsk+ T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl++a+++i++l+ ++++++ +        sa++++++       
  TRIDC1AG049430.3  12 GGKDRHSKVRTVKGLRDRRVRLSVPTAIQLYDLQDRLGLSQPSKVVDWLLNAAQHEIDKLPPLQFPPHDDD----LLLSAHHHHHHlqptssm 100
                       78******************************************************************333....333333333333333211 PP

               TCP  89 kaaksaakskksqksaasalnlakesr 115
                        +++  ++ +++++ aas+  ++ ++ 
  TRIDC1AG049430.3 101 TSMAMVPPFSHATAAAASMMVVDSDKA 127
                       333333333333333333333333333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
ESRIVRVSRV FGGKDRHSKV RTVKGLRDRR VRLSVPTAIQ LYDLQDRLGL SQPSKVVDWL  60
LNAAQHEIDK LPPLQFPPHD DDLLLSAHHH HHHLQPTSSM TSMAMVPPFS HATAAAASMM  120
VVDSDKAAQA HDGGGDLKGF MSLSNSLGLV NGAGASMPTL AAAQAGSYHH HYAAHEAWSN  180
GGNNVQEQLG GHRSSPHVVP HHGLPFPSLL SLAPVSQFVF YTPEGGFAMK DVASDDQFPV  240
DNLDDSQGQL SLSSRGEAFF TQEARVDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60970.12e-41TCP family protein