PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG050040.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 174aa MW: 19561.8 Da PI: 10.6731

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG050040.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	39.8	7.7e-13	2	43	12	53
HHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 12 leeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 l++L e F+ n+yps++ +e LA++lgLt rqV WF rR TRIDC1AG050040.7 2 LQRLHEQFKTNQYPSRAVKESLAQELGLTFRQVEKWFESRRR 43 689*************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence
FLQRLHEQFK TNQYPSRAVK ESLAQELGLT FRQVEKWFES RRRHIRVASN KSSTHVENHS 60 TKENPNVCKR DAVNEDTPSG SLNEGITQDG PLKQDIGGGL RTNASPPNSS QRYTTPLVRR 120 PKGESRENHM KNTSSSSAGR PKGSDAGYAV LALEAFDEKT RSKMLQELKK RKIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19510.1	8e-11	HB-PHD family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG050040.7