PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG050400.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 386aa    MW: 39736.3 Da    PI: 5.2574
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG050400.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.24.7e-18262296135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  TRIDC1AG050400.1 262 CLHCETDKTPQWRTGPLGPKTLCNACGVRYKSGRL 296
                       99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MEAAAECAGG GGGGLREVKK EAGAGDVFLV DDLLDLPCDD DEEEDDAAAA GFADGAADCS  60
AGEAGAGDVG NASADSSTVT AVDSCSNSLS GGLADGDFSG GLCEPYDQLA ELEWLSNYMG  120
DDNFPTEDLR KLQLISGIPS ASSQTAPRAP AAAPVQPCGG GGAVGTALWR SEAHAGQVSV  180
PGKARSKRSR VAPCNWSSRL LVLAPAPASP PSPASAVISP SESGTAFPLF PNKKPAKSSK  240
KEAPAAPAMT AAEAAAAEGR RCLHCETDKT PQWRTGPLGP KTLCNACGVR YKSGRLVPEY  300
RPAASPTFVP SKHSNSHRKV VELRRQKDAP PQQLLHQPQQ QQLGPGLGFH VPSPLLFDGP  360
AAPHLGGGAD EFLIRNRIGP DHRQLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.19e-61GATA family protein