PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG050400.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 284aa    MW: 30240.4 Da    PI: 10.1343
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG050400.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.83.1e-18160194135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  TRIDC1AG050400.3 160 CLHCETDKTPQWRTGPLGPKTLCNACGVRYKSGRL 194
                       99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MYQYDQLAEL EWLSNYMGDD NFPTEDLRKL QLISGIPSAS SQTAPRAPAA APVQPCGGGG  60
AVGTALWRSE AHAGQVSVPG KARSKRSRVA PCNWSSRLLV LAPAPASPPS PASAVISPSE  120
SGTAFPLFPN KKPAKSSKKE APAAPAMTAA EAAAAEGRRC LHCETDKTPQ WRTGPLGPKT  180
LCNACGVRYK SGRLVPEYRP AASPTFVPSK HSNSHRKVVE LRRQKDAPPQ QLLHQPQQQQ  240
LGPGLGFHVP SPLLFDGPAA PHLGGGADEF LIRNRIGPDH RQLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.17e-56GATA family protein