PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG052220.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YC
Protein Properties Length: 135aa    MW: 13885.7 Da    PI: 9.2321
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG052220.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC87.91e-27211091897
             NF-YC  18 nhelPlarikkilkade.d........vkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivp 97 
                        h+lPlarikki+k    d         +mis eaPv++s+acelf+ elt  +w  + e +rrt++  d+aaav  td fdflvd+v 
  TRIDC1AG052220.1  21 PHALPLARIKKIMKRSAgDgsggygagARMISGEAPVVFSRACELFVAELTQAAWAATLEGRRRTVHAEDVAAAVRDTDLFDFLVDVVK 109
                       599***********753212222333389*********************************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MRISRPYSGV SRSGATARTG PHALPLARIK KIMKRSAGDG SGGYGAGARM ISGEAPVVFS  60
RACELFVAEL TQAAWAATLE GRRRTVHAED VAAAVRDTDL FDFLVDVVKP RPGDDGVGDG  120
VGLAPAAGVH GGALD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.34e-21NF-YC family protein