PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG052370.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YC
Protein Properties Length: 130aa    MW: 13652.5 Da    PI: 8.7912
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG052370.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC88.47e-28211091897
             NF-YC  18 nhelPlarikkilkade.d........vkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivp 97 
                        h+lPlarikki++    d         +mis+eaPvl+s+acelf+ elt  +w  + e +rrt++  d+aaav  t++fdflvd+v 
  TRIDC1AG052370.1  21 PHALPLARIKKIMRRSArDgsggdgagARMISCEAPVLFSRACELFVAELTRAAWDATLEGRRRTVHAEDVAAAVRDTNVFDFLVDVVK 109
                       599**********9643122222233389*********************************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MRLPSPYSGV FRGGSTARTG PHALPLARIK KIMRRSARDG SGGDGAGARM ISCEAPVLFS  60
RACELFVAEL TRAAWDATLE GRRRTVHAED VAAAVRDTNV FDFLVDVVKA RPSDDGVNAG  120
DGEGGVAPAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.32e-26NF-YC family protein