PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG053340.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 152aa    MW: 17063.5 Da    PI: 8.8461
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG053340.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR128.64.6e-0998142147
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 
                       +fY++YA++v F vr  ++k +  n+   +++f C keg+r e+   
  TRIDC1AG053340.1  98 EFYRTYAHNVRFGVRLGQQKVT--NNVLQWKRFLCAKEGFRPEKGMV 142
                       6****************99888..8889*************998765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
MEGSSATSPL EEPTFRIIAN CVPTLSAVES VNSAENQVFS DATSFGEINS PMLLIDDSST  60
PKKKQSFSQE GSLYKPQCHE ELKPKVGMLF DDIGSVLEFY RTYAHNVRFG VRLGQQKVTN  120
NVLQWKRFLC AKEGFRPEKG MVVVDPSKKR RK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1148152KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.12e-07FAR1 family protein