PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG053750.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 291aa    MW: 31639.2 Da    PI: 6.2351
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG053750.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.33.1e-171663148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g W++eEde+l++ + ++G g+W++++r  g++R++k+c++rw +yl
  TRIDC1AG053750.3 16 KGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAGLNRCGKSCRLRWINYL 63
                      678*******************************************97 PP
2Myb_DNA-binding50.16.4e-1669112146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg ++++E++ +v +++ lG++ W+ Ia++++ gRt++++k++w++
  TRIDC1AG053750.3  69 RGCFSQQEEDNIVALHQILGNR-WSQIASHLP-GRTDNEIKNFWNS 112
                       899*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MGRPSSGGVG QPKLRKGLWS PEEDEKLYNH IIRHGVGCWS SVPRLAGLNR CGKSCRLRWI  60
NYLRPDLKRG CFSQQEEDNI VALHQILGNR WSQIASHLPG RTDNEIKNFW NSCIKKKLRQ  120
QGIDPATHKP MGAADTATAA LPDAEDEDRK PLAAAADSSL APKQPAVFDP FPVCADYGAE  180
FADGLGTANA AALYGQFGCG KEGADEDAGF GAADYSCVLD VSENLGYGES SSNSSNWNYG  240
GEVGSVLDGE VPHWGKAEME QQHTPLEHKS SLPCQEQSLL YRTAKNHQKA N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.17e-70MYB family protein