PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG053770.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 273aa    MW: 30380.1 Da    PI: 6.5049
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG053770.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.73.6e-151663148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g W++ Ede+l++ + ++G g+W++++r  g++R++k+c+ rw++yl
  TRIDC1AG053770.3 16 KGLWSPVEDEKLYNHIIRHGVGCWSSVPRLAGLHRCGKSCRFRWLNYL 63
                      678*******************************************97 PP
2Myb_DNA-binding48.91.5e-1569112146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg+++++E++ +v +++ lG++ W+ Ia++++ gRt++++k++w++
  TRIDC1AG053770.3  69 RGSFSQQEEDHIVALHQILGNR-WSQIASRLP-GRTDNEIKNFWNS 112
                       899*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MGHPSSGGMG QPKLRKGLWS PVEDEKLYNH IIRHGVGCWS SVPRLAGLHR CGKSCRFRWL  60
NYLRPDLRRG SFSQQEEDHI VALHQILGNR WSQIASRLPG RTDNEIKNFW NSCIKKKLRQ  120
QGIDPATHKP MGAMATAALP DVEMEDRKAL STVVDGGLAQ KQQLVFDPFP VCADYGGGFA  180
EDLSAANDAG FGTGDYSCVL GVSENLGYGE SSSNSSNWNY GGEVGNVLHG EVLDWAKAEM  240
ERQHDQLLEH KFSLPCPEQS LLANFEFNLE QYF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.11e-70MYB family protein