PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG054450.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 274aa    MW: 29684 Da    PI: 6.7823
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG054450.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.69.7e-21144193255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+W+AeIrdp+    r  r++lg+f+tae+Aa+a+++a+ +++g
  TRIDC1AG054450.3 144 KYRGVRQRP-WGKWAAEIRDPR----RaVRVWLGTFDTAEDAARAYDRAAVEFRG 193
                       8********.**********82....48***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
TTNNTTRTHM TFSVSPAMAG GQGHEYMIRF HSHFDDPSPS TATAEPPPFA GRAISPEQEH  60
GAMVAALLHV ISGYTTPPPD FFFPAAASKE VCPVCRVDGC LGCEFFGAAE ATGATAAALD  120
APKSAPAAVT AGGPQRRRRN KKNKYRGVRQ RPWGKWAAEI RDPRRAVRVW LGTFDTAEDA  180
ARAYDRAAVE FRGPRAKLNF PFPEQQQQQQ LGDGNAAPAK SDTCSPSPSS AEVDVRVPRN  240
GGQETGDQLW DGLQDLMKLD ESELWFPPSG NSWD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-27ERF family protein