PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG054800.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 250aa    MW: 28683.4 Da    PI: 10.0329
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG054800.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.52.6e-172369148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g WT+eEd +lv++v+q+G + W+  a++++  R +kqc++rw+++l
  TRIDC1AG054800.1 23 KGQWTPEEDRKLVKLVEQFGLRKWSQMAQMLP-ARVGKQCRERWHNHL 69
                      799*****************************.*************97 PP
2Myb_DNA-binding40.37.2e-1375116145
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       ++ W++eEd  l++ +k+ G++ W+ Ia++++ gRt+  +k++w+
  TRIDC1AG054800.1  75 KDTWSEEEDMVLIQTHKEVGNK-WAEIAKRLP-GRTE-TIKNHWN 116
                       679*******************.*********.***9.9*****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MSGRFIPRRK ASSKAVKKAN VVKGQWTPEE DRKLVKLVEQ FGLRKWSQMA QMLPARVGKQ  60
CRERWHNHLR PNIKKDTWSE EEDMVLIQTH KEVGNKWAEI AKRLPGRTET IKNHWNATKR  120
KQSARRRARS RVKNPKSGTL LQNYIKSLGI ACSKGIAPQD PKESPLSASS PAPPTQNRAH  180
VNDNWPESNP SNIMVTQGIF STDDRQIHSC EEILVPTSDD FSVDMFDGLF NAEEVQYQAY  240
NIDDDVDMDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.19e-56MYB family protein