PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG055770.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 190aa MW: 20642.4 Da PI: 9.5119

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG055770.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.5	9.8e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEde+l +v+ G g +W + +++ g++R++k+c++rw++yl TRIDC1AG055770.4 14 RGPWSPEEDEQLRSYVRANGVGgNWIALPHKAGLNRCGKSCRLRWLNYL 62 89****************999**********************97 PP
2	Myb_DNA-binding	36.1	1.5e-11	71	111	4	46
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 T++Ed + + + G++ W+ Ia++++ gRt++++k++w++ TRIDC1AG055770.4 71 YTEQEDRVICSLYASIGSR-WSIIASKLP-GRTDNDVKNYWNT 111 69***************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MGRAPCCDKA RVKRGPWSPE EDEQLRSYVR ANGVGGNWIA LPHKAGLNRC GKSCRLRWLN 60 YLRPDIRHGG YTEQEDRVIC SLYASIGSRW SIIASKLPGR TDNDVKNYWN TKLKKKATPS 120 GPAGSWSQCV PSTLQPAALS PAASGSSSVD TTSSGGDMCF APAGMYQPHH PMQGFVHVDS 180 SPQTVLAPMP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	2e-69	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG055770.4