PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG055770.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 47aa    MW: 5165.86 Da    PI: 9.4584
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG055770.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.62.8e-081446132
                      TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmg 32
                      rg+W++eEde+l  +v+  G g +W + +++ g
  TRIDC1AG055770.5 14 RGPWSPEEDEQLRSYVRANGVGgNWIALPHKAG 46
                      89******************9999988887776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 47 aa     Download sequence    
MGRAPCCDKA RVKRGPWSPE EDEQLRSYVR ANGVGGNWIA LPHKAGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36890.15e-25MYB family protein