PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG058330.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 172aa MW: 20078.1 Da PI: 9.8485

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG058330.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	44.8	4.2e-14	3	82	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn Y+ e GF +r ks+ + n++ +++ vC gk+ e+++ + r++C a +++ ++kd+ w++tkl+ eHnH+l+p TRIDC1AG058330.1 3 FYNLYSWEKGFGIRYGKSRLN-VNRTKCMQEIVCGYAGKPIVENTR---------SCRCECPALVRLLRSKDNGWYITKLRDEHNHSLSP 82 9**************9998.555578899**999886555.........99****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MIFYNLYSWE KGFGIRYGKS RLNVNRTKCM QEIVCGYAGK PIVENTRSCR CECPALVRLL 60 RSKDNGWYIT KLRDEHNHSL SPTYGQTLHW PSHKHIDLYS RDLVKQLREN NVNMSKVYSI 120 IGSFFGKMGN VLFMKRALRN LCGKIGRDQA EDDVRKTMEV FQELGAKDQQ FT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	2e-08	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG058330.1