PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG059680.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 116aa    MW: 13141.7 Da    PI: 9.3254
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG059680.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.31.7e-084590345
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                       W++ E + + +a + +G      W+++a+ mg ++++++++ ++q
  TRIDC1AG059680.1 45 EWSKKENKMFEEALAYYGEAapnLWEKVASAMGGTKSAEEVRRHFQ 90
                      7*****************99*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    
LKTSEYQIQE ASTSSSRISL GKLYLLRRMS SGSSSRSTSP SSDSEWSKKE NKMFEEALAY  60
YGEAAPNLWE KVASAMGGTK SAEEVRRHFQ ILVDDVNNIE YGRIPFPKYK TQGFWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.11e-23MYB_related family protein