PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG059780.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 80aa    MW: 9172.38 Da    PI: 9.5336
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG059780.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding301.2e-09754145
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                      +  W++ E + + +a + +G g    W+++a+ mg ++++++++ ++q
  TRIDC1AG059780.1  7 KSEWSKKENKMFEEALAYYGVGapnLWEKVASAMGGTKSAEEVRRHFQ 54
                      578********************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 80 aa     Download sequence    
MSSPSSKSEW SKKENKMFEE ALAYYGVGAP NLWEKVASAM GGTKSAEEVR RHFQFLVDDV  60
KNIEHGRIPF PKYKTQGFWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.12e-20MYB_related family protein