PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG059930.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 223aa MW: 24092.8 Da PI: 8.951

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG059930.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.1	3.2e-16	22	69	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd+ l+++v+ G g W++ ar g++Rt+k+c++rw++yl TRIDC1AG059930.2 22 KGPWTMEEDLVLANYVAANGEGAWNSLARAAGLNRTGKSCRLRWLNYL 69 79********************************************97 PP
2	Myb_DNA-binding	56.5	6.5e-18	75	118	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+v++ +++G++ W++Iar+++ gRt++++k++w++ TRIDC1AG059930.2 75 RGNITPEEHLLIVELQARWGNR-WSKIARHLP-GRTDNEIKNFWRT 118 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
SGTRAPEGRR RTMQCAEPAV RKGPWTMEED LVLANYVAAN GEGAWNSLAR AAGLNRTGKS 60 CRLRWLNYLR PDVRRGNITP EEHLLIVELQ ARWGNRWSKI ARHLPGRTDN EIKNFWRTKI 120 QKKRSGGATA SDSTGCQLPS STAVTESQSS SSNSVGRPGA MPHYDVVTAA TQPGGWGDHQ 180 LGYAVQGGGG AACAGDMDGG VPPEFLQAAA VAGDNFWGLE EFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27810.1	2e-66	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG059930.2