PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG060580.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 346aa MW: 38430.5 Da PI: 8.7078

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG060580.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	65.1	1.3e-20	172	225	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+ Wt eLH++Fvea ++L + A+Pk+il+lm+ Lt+e+++SHLQk+R+ TRIDC1AG060580.1 172 KARVIWTDELHKKFVEAHDKL-LPGDAVPKKILKLMNDSTLTRENIASHLQKHRM 225 68*****************.8999**************************7 PP
2	Myb_DNA-binding	36.2	1.4e-11	176	224	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT e+++++v+a+ +l +g +k+I + m+ ++t++++ s++qk++ TRIDC1AG060580.1 176 IWTDELHKKFVEAHDKLLPGdaVPKKILKLMNdSTLTRENIASHLQKHR 224 5**************9999************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
VDAVRLSTIA AILRDRDHYE VTVCTDPAAA MAVLRAGNKF EVVLVEMNSL GCGAPAFELL 60 ECAVGEMHVE THAISKNGQR YGPLEMVDLG NIRNVIYNEA TNGSKSLQIM SNSPCNNSPV 120 VTVPTTTAFV ISGRRATRRR MRRTRVNDTN SQELDEVNVK NEKQKPAEKP TKARVIWTDE 180 LHKKFVEAHD KLLPGDAVPK KILKLMNDST LTRENIASHL QKHRMNLDPL RKGNTGTRNN 240 KLTPPQASLL SSNLQASSTM MQSLSSANFP EIITTQAVAC MNHNMNDSGS HPLIHMQSFK 300 ASKDMYNGDN ESTKNSTAGF QENNIEFSIK EPKLSWDQVY FYTNGN

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

VDAVRLSTIA AILRDRDHYE VTVCTDPAAA MAVLRAGNKF EVVLVEMNSL GCGAPAFELL  60
ECAVGEMHVE THAISKNGQR YGPLEMVDLG NIRNVIYNEA TNGSKSLQIM SNSPCNNSPV  120
VTVPTTTAFV ISGRRATRRR MRRTRVNDTN SQELDEVNVK NEKQKPAEKP TKARVIWTDE  180
LHKKFVEAHD KLLPGDAVPK KILKLMNDST LTRENIASHL QKHRMNLDPL RKGNTGTRNN  240
KLTPPQASLL SSNLQASSTM MQSLSSANFP EIITTQAVAC MNHNMNDSGS HPLIHMQSFK  300
ASKDMYNGDN ESTKNSTAGF QENNIEFSIK EPKLSWDQVY FYTNGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58080.1	4e-15	ARR-B family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG060580.1