PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG060590.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 386aa MW: 43368.4 Da PI: 8.8035

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG060590.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	65.7	7.9e-21	181	234	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++Wt eLH++Fvea ++L + A+Pk+il+lm+ Lt+e+++SHLQk+R+ TRIDC1AG060590.1 181 KARVVWTDELHKKFVEAHDKL-LPGDAVPKKILKLMNDSTLTRENIASHLQKHRM 234 68*****************.8999**************************7 PP
2	Myb_DNA-binding	37.2	6.6e-12	183	233	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT e+++++v+a+ +l +g +k+I + m+ ++t++++ s++qk++ TRIDC1AG060590.1 183 RVVWTDELHKKFVEAHDKLLPGdaVPKKILKLMNdSTLTRENIASHLQKHR 233 678**************9999************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
RRALAFSMLA VRISFMTAKL RQLGYNEVTA CTDPAAAMAE LRGGHKFKAV LVDVYSLRYS 60 PAPAFELLDC AIGEMHIDTY AMSKTGVRYG PIVMEDLNRI REGIYNKASN GFESLEATLN 120 SSCNNTSVMT MPTTTTLLIS GRRATRRRVR MTQVSDSNSQ QELDGGSVKN EQQNPAEKPK 180 KARVVWTDEL HKKFVEAHDK LLPGDAVPKK ILKLMNDSTL TRENIASHLQ KHRMNIDPLR 240 RGNPKTKHQK LTPPQASLSS PNLSQQQASP TMMQPLSSSN FSETSITQGV VCMNHNMNVQ 300 PMVKPPPVSD MQDSHPAMYM QSFKDSTFCQ TECVFSEDLE SKDMYTRDNK SKQNSTWCPD 360 NLDISTILDK DPKPSWDVKY LFYNGD

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

RRALAFSMLA VRISFMTAKL RQLGYNEVTA CTDPAAAMAE LRGGHKFKAV LVDVYSLRYS  60
PAPAFELLDC AIGEMHIDTY AMSKTGVRYG PIVMEDLNRI REGIYNKASN GFESLEATLN  120
SSCNNTSVMT MPTTTTLLIS GRRATRRRVR MTQVSDSNSQ QELDGGSVKN EQQNPAEKPK  180
KARVVWTDEL HKKFVEAHDK LLPGDAVPKK ILKLMNDSTL TRENIASHLQ KHRMNIDPLR  240
RGNPKTKHQK LTPPQASLSS PNLSQQQASP TMMQPLSSSN FSETSITQGV VCMNHNMNVQ  300
PMVKPPPVSD MQDSHPAMYM QSFKDSTFCQ TECVFSEDLE SKDMYTRDNK SKQNSTWCPD  360
NLDISTILDK DPKPSWDVKY LFYNGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05090.1	1e-16	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG060590.1