PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG060610.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YB
Protein Properties Length: 136aa    MW: 14933 Da    PI: 5.3588
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG060610.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB1733.1e-5414109297
             NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 
                       +eq+rflPian++rim++ +P+n+ki+kdake++qecvsefisf+tseasdkc +ekrktingddl+w+++tlGfedyveplk+ylk yre+e
  TRIDC1AG060610.2  14 KEQERFLPIANIGRIMRRGVPENGKIAKDAKESIQECVSEFISFITSEASDKCMKEKRKTINGDDLIWSMGTLGFEDYVEPLKLYLKLYREME 106
                       89******************************************************************************************* PP

             NF-YB  95 gek 97 
                       g++
  TRIDC1AG060610.2 107 GDT 109
                       *96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
MSEAVGTPES SGAKEQERFL PIANIGRIMR RGVPENGKIA KDAKESIQEC VSEFISFITS  60
EASDKCMKEK RKTINGDDLI WSMGTLGFED YVEPLKLYLK LYREMEGDTS KGSKSEQAAK  120
KVGALNGQPG SSFNGM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53340.13e-61NF-YB family protein