PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG060940.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 262aa    MW: 28621.5 Da    PI: 5.142
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG060940.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS194.75.9e-603222160373
              GRAS 160 etgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrll....desvsleserdevLklvkslsPkvvvvveqeadh 248
                       e g rLa++A++++vpf+f+ +++++l++l++++++v pgEa+aVn++ qlhrll    + s+sl+ ++d vL  + s++P+v++vveqeadh
  TRIDC1AG060940.1   3 EAGLRLAELARAMNVPFSFQRVTEDSLDQLKPWMFQVLPGEAVAVNSICQLHRLLvdpdAASTSLPTPIDVVLGWIASMQPRVFTVVEQEADH 95 
                       7799***************************************************5555555666669************************* PP

              GRAS 249 nsesFlerflealeyysalfdsl.eaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqakl 339
                       n++++ +rf +a+ yy +++ds+ +++++r++   +     ++++rei ++v+ eg++r+erhe l+ W +rl ++G++ vpl+ +aa qa  
  TRIDC1AG060940.1  96 NKPRLSTRFENAMFYYGSVLDSMeAMSVSRDDvIGNGAGADAYVQREIFDIVCGEGSARTERHEPLACWCDRLWRMGLTHVPLGPSAAYQAAK 188
                       ***********************77788888874555566777************************************************** PP

              GRAS 340 llrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                       l+r+++s g+rv+e  g+l l+W++rpL+++S+W
  TRIDC1AG060940.1 189 LVRMFSSAGFRVQEIGGCLSLMWHERPLFTASVW 222
                       ********************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
VDEAGLRLAE LARAMNVPFS FQRVTEDSLD QLKPWMFQVL PGEAVAVNSI CQLHRLLVDP  60
DAASTSLPTP IDVVLGWIAS MQPRVFTVVE QEADHNKPRL STRFENAMFY YGSVLDSMEA  120
MSVSRDDVIG NGAGADAYVQ REIFDIVCGE GSARTERHEP LACWCDRLWR MGLTHVPLGP  180
SAAYQAAKLV RMFSSAGFRV QEIGGCLSLM WHERPLFTAS VWSAMPANGA GPGAAEERAD  240
KQKLKRSIGE SSSGHLPDAG AQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.11e-43GRAS family protein