PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG060980.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 99aa    MW: 11313 Da    PI: 8.3696
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG060980.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH39.21.2e-122449126
                      --S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                      yktelC+ + ++G C y d+C+FaHg
  TRIDC1AG060980.1 24 YKTELCNKWEESGACLYADQCQFAHG 49
                      9************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
GDRRGQVVKS ASGLEFEAYS QGMYKTELCN KWEESGACLY ADQCQFAHGI AELRPIIRHP  60
RYKTQVCRMV IGGGLCPYSY RCHFRHSITP ADYFPLLHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66810.11e-43C3H family protein