PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG061580.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 101aa    MW: 11145.5 Da    PI: 8.4633
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG061580.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.82.1e-07549445
                      S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding  4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                      WT+   +l+ +a + +  +   +W+ +a+ +g g+++ +++ ++ 
  TRIDC1AG061580.1  5 WTPKQNKLFEQALAVHDRDtpdRWHNVAHAVGGGKSADDVRRYYE 49
                      *****************99************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    
GRAGWTPKQN KLFEQALAVH DRDTPDRWHN VAHAVGGGKS ADDVRRYYEL LVRDVANIEA  60
GKVPFPAYRP PCPGPNVGYE ADRFVLPLTS SLGVLAYQIN S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.12e-28MYB_related family protein