PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG061610.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 63aa    MW: 6809.43 Da    PI: 9.3684
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG061610.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.85e-081552338
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlk 38
                      +WT+  ++++ +a + +  +   +W+ +ar+mg   t +
  TRIDC1AG061610.1 15 AWTQRQHKQFECALAVYDRDtphRWHDVARYMG-AATSN 52
                      8*****************99*************.55544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 63 aa     Download sequence    
SMSSVAGSKG SATTAWTQRQ HKQFECALAV YDRDTPHRWH DVARYMGAAT SNASSTTSCR  60
SSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.27e-13MYB_related family protein