PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG000730.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 226aa    MW: 25147.6 Da    PI: 9.7161
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG000730.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.12.7e-151461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT+ Ed+ l+++++ +G g+W++ ++  g+ R++k+c++rw +yl
  TRIDC1BG000730.1 14 RGKWTAKEDDTLAKYIAGHGEGSWRSLPKNAGLLRCGKSCRLRWVNYL 61
                      89******************************99************97 PP
2Myb_DNA-binding57.72.6e-1867111147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg++++eEd+l+v++++ lG+  W++Ia++++ gRt++++k++w+ +
  TRIDC1BG000730.1  67 RGNFSKEEDDLIVKLHATLGNT-WSLIASHLP-GRTDNEIKNYWNAH 111
                       89******************99.*********.***********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MGRAPCCEKV GLKRGKWTAK EDDTLAKYIA GHGEGSWRSL PKNAGLLRCG KSCRLRWVNY  60
LRDGVRRGNF SKEEDDLIVK LHATLGNTWS LIASHLPGRT DNEIKNYWNA HLSRQIHSFR  120
RMYTAGKETT ITIDMNKLST ASKRRGGRAP RSSTKKQPVL EPTKSMECSR PVGDMSSSTS  180
SLPQGNSETM LDQNQPITII TNDTACSEEP MIMDPIDLNG GVLEPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.14e-71MYB family protein