PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG001700.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 261aa    MW: 29665.6 Da    PI: 7.8029
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG001700.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR134.28.1e-1125104190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       ++Yn Y+ e+GF vr  ks+ + + +   +++ vC ++g +++++++           r+ C a +++ ++kd+ w ++++   Hn +l+
  TRIDC1BG001700.1  25 DYYNLYSWEIGFGVRYGKSRLNVERT-KCMQEIVCGCSGIPKKSNTR---------ACRCRCPALIRLLRSKDNGWDISEFIPSHNPSLM 104
                       69****************99995544.67899********9987655.........89****************************8775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
AEKKTDTVIV PAVGSTFDSL GEAYDYYNLY SWEIGFGVRY GKSRLNVERT KCMQEIVCGC  60
SGIPKKSNTR ACRCRCPALI RLLRSKDNGW DISEFIPSHN PSLMEKFGEK VYWPSHRHID  120
IYTHDVVKQL RENNNGIGKV YNIIDSFFGS MFNVPFTKRA LRGLCGKISR EQEGDDVGKT  180
MDAFVELGAK DTGLYRVRPD EDSRIHNLLW STGSSRAQYH FFGDAITFET TYSTDFYDMP  240
FGLFVGVNNH FHTVIFGGVL V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.11e-23FAR1 family protein