PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG003090.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 211aa    MW: 23525.6 Da    PI: 9.0137
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG003090.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.94.7e-181561248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      grWT+eEd++l ++++q+G g+W++ ++  g+ R++k+c++rw++yl
  TRIDC1BG003090.1 15 GRWTAEEDDILTKYIAQHGEGSWRSLPKNAGLLRCGKSCRLRWLNYL 61
                      8******************************99************97 PP
2Myb_DNA-binding52.98.8e-1767110146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg++++eEd l+v++++ lG++ W+ Ia++++ gRt++++k++w +
  TRIDC1BG003090.1  67 RGNFSKEEDNLIVKLHATLGSR-WSVIASYLP-GRTDNEIKNYWDT 110
                       89********************.*********.***********66 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MGRAPCCEKV GLKQGRWTAE EDDILTKYIA QHGEGSWRSL PKNAGLLRCG KSCRLRWLNY  60
LSDGVKRGNF SKEEDNLIVK LHATLGSRWS VIASYLPGRT DNEIKNYWDT HPSRHIYNFR  120
HVYAAFSGTT VTIDVNKLSA TTKRRGGKAP RSSTKMQPMP EPTKPKEGSS PVDAISTTSN  180
QADPDRDQQP INNITCGVLC SEEAMVMDPV D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.16e-67MYB family protein