PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG003980.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 142aa    MW: 16761.1 Da    PI: 7.1435
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG003980.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS112.36.3e-358134248374
              GRAS 248 hnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqakll 340
                       h+s+ F +rf e + +ys++fd+l+a++pr +e+r+++Er  +gr++ n++ace aer++r e++++W+ r+ +aGF+++p+++ + k++ ++
  TRIDC1BG003980.1   8 HSSPFFIQRFKEVMLHYSSVFDMLDANVPRVNEARKMLERIPFGRDALNIIACEDAERTHRPESYRQWQGRFLKAGFQQLPVDQAILKNIVHM 100
                       78999**************************************************************************************** PP

              GRAS 341 lrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                        + ++ +++   e+ g+l++gWk+r ++++S Wr
  TRIDC1BG003980.1 101 KNLHYHEEFFAVEDCGWLLQGWKGRVMYAISKWR 134
                       *****999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
SGTVNGLHSS PFFIQRFKEV MLHYSSVFDM LDANVPRVNE ARKMLERIPF GRDALNIIAC  60
EDAERTHRPE SYRQWQGRFL KAGFQQLPVD QAILKNIVHM KNLHYHEEFF AVEDCGWLLQ  120
GWKGRVMYAI SKWRPDETYD DQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.17e-46GRAS family protein