PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG004000.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 168aa    MW: 19338.3 Da    PI: 10.7135
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG004000.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS124.99.3e-39431681129
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lL++cAeav+++++ la+ lL++++ ++s +gd +qRla+y++ +L+arla+ +s++y+ l  ++ts   +++ l a++lf e++P+ ++
  TRIDC1BG004000.1  43 LRTLLIHCAEAVAKDNHLLANDLLKKIRRHSSTNGDCTQRLAFYLVDGLEARLAGIGSQVYRNLMERRTS---TTDWLEAYNLFLEACPFKRV 132
                       6789***********************************************************9999998...8999**************** PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLl 129
                       s+  aNq+Il+  +++ rvHi+D++is G+QWp+++
  TRIDC1BG004000.1 133 SYNFANQTILDVSQRQPRVHIVDLGISFGFQWPSMI 168
                       *********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
LDGIARLRER MAGEGNKNSL KIRSKGRQKL RVRKQPRKEL VDLRTLLIHC AEAVAKDNHL  60
LANDLLKKIR RHSSTNGDCT QRLAFYLVDG LEARLAGIGS QVYRNLMERR TSTTDWLEAY  120
NLFLEACPFK RVSYNFANQT ILDVSQRQPR VHIVDLGISF GFQWPSMI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.12e-43GRAS family protein