PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG005490.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 238aa    MW: 27380.3 Da    PI: 9.1068
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG005490.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR150.95.3e-1641120190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fYn Y+ e+GF vr +ks+ + +  +  +++ vC + gk+ +e+++         ++r+gC+a++++ +++d+ w++++ +  HnH+l+
  TRIDC1BG005490.2  41 EFYNLYSWECGFGVRLAKSRLNVER-KRCMQEIVCACAGKPIRENSR---------SSRCGCNAMIRLLRSNDKGWYIAEHKDAHNHPLS 120
                       6*****************9999554.478899*******99886555.........99******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MNPNRKSALE LSLRAYADKK DGPVLCPSIG TSFDSIDEAY EFYNLYSWEC GFGVRLAKSR  60
LNVERKRCMQ EIVCACAGKP IRENSRSSRC GCNAMIRLLR SNDKGWYIAE HKDAHNHPLS  120
LTCGQKLHWK SHRHIDRYTK DLVKQLRDNN VGLGKVFSIV GSYFGSVDNV PFTKRSLKTL  180
CRKLNREQSD MDAVKTMEIL SEMKANDPDF NYTVQVDEES RVKTLMWVTS KGFDQYRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.16e-17FAR1 family protein