PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG005490.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 344aa MW: 38928.3 Da PI: 8.3099

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG005490.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.9	1.1e-15	148	227	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF vr +ks+ + + + +++ vC + gk+ +e+++ ++r+gC+a++++ +++d+ w++++ + HnH+l+ TRIDC1BG005490.3 148 EFYNLYSWECGFGVRLAKSRLNVER-KRCMQEIVCACAGKPIRENSR---------SSRCGCNAMIRLLRSNDKGWYIAEHKDAHNHPLS 227 6***************9999554.478899***99886555.........99****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MSTNGVELDG YDYHGTCIRF LFCRVFVGFL TSFLLIDSYR VCAPPAAWNS CAYPVESQDS 60 MSVPTMAFGT GGDAQLVGDA ARAEVCSEAT SGWTRRVRIG KAPEEREMNP NRKSALELSL 120 RAYADKKDGP VLCPSIGTSF DSIDEAYEFY NLYSWECGFG VRLAKSRLNV ERKRCMQEIV 180 CACAGKPIRE NSRSSRCGCN AMIRLLRSND KGWYIAEHKD AHNHPLSLTC GQKLHWKSHR 240 HIDRYTKDLV KQLRDNNVGL GKVFSIVGSY FGSVDNVPFT KRSLKTLCRK LNREQSDMDA 300 VKTMEILSEM KANDPDFNYT VQVDEESRVK TLMWVTSKGF DQYR

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MSTNGVELDG YDYHGTCIRF LFCRVFVGFL TSFLLIDSYR VCAPPAAWNS CAYPVESQDS  60
MSVPTMAFGT GGDAQLVGDA ARAEVCSEAT SGWTRRVRIG KAPEEREMNP NRKSALELSL  120
RAYADKKDGP VLCPSIGTSF DSIDEAYEFY NLYSWECGFG VRLAKSRLNV ERKRCMQEIV  180
CACAGKPIRE NSRSSRCGCN AMIRLLRSND KGWYIAEHKD AHNHPLSLTC GQKLHWKSHR  240
HIDRYTKDLV KQLRDNNVGL GKVFSIVGSY FGSVDNVPFT KRSLKTLCRK LNREQSDMDA  300
VKTMEILSEM KANDPDFNYT VQVDEESRVK TLMWVTSKGF DQYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	2e-16	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG005490.3