PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG006410.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 190aa MW: 20219.1 Da PI: 7.8456

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG006410.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.00052	43	65	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+++F++ L H +H TRIDC1BG006410.1 43 FVCKTCDRMFPSFQALGGHRASH 65 89**********99999998887 PP
2	zf-C2H2	10.9	0.0014	83	103	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cg F L+ H+r H TRIDC1BG006410.1 83 CSICGLEFAVGQALRGHMRHH 103 *******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MMKRFAFEER DMAGMLLTVS REQAMPMPVL VAARGDRGQE RAFVCKTCDR MFPSFQALGG 60 HRASHKKPRM DGDSDLKPKM HGCSICGLEF AVGQALRGHM RHHRAMVAGG GGVVPAPPAT 120 TSNNSVVSSN ALVGSGSIKP GLWLDLNHPP CDDGNGMDAD HGECGHGAPA AGYKFHQFLD 180 NSTMAVDCVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59820.1	7e-23	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG006410.1