PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG006460.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 178aa    MW: 19526.5 Da    PI: 8.3987
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG006460.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.000364365123
                      EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                      ++C+ C+++F++   L  H  +H
  TRIDC1BG006460.2 43 FVCKTCDRVFPSFQALGGHRASH 65
                      89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MTKRFAFKEK EMARVLLLVS REQAKPMPMP MAVRGDRAPE RVFVCKTCDR VFPSFQALGG  60
HRASHKKPRL DDGGDLKPKL HGCSICDLEF AIGQALGGHM RRHRAMAMGG GVMAMPLPAV  120
IKKHSGDNHA VVGEKRGLWL DLNHPPCDEY GSGSEGDDEC SHDAAAAGYT FHQFLDTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.12e-18C2H2 family protein