PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG006470.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 182aa MW: 19594.6 Da PI: 7.7858

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG006470.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.7	0.00038	43	65	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+++F++ L H +H TRIDC1BG006470.3 43 FVCKTCDRVFPSFQALGGHRASH 65 89**********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 182 aa Download sequence
MTKRFAFEEK EMARMLLVVS REQLMPMPMP VAARGDRAPE RVFVCKTCDR VFPSFQALGG 60 HRASHKKPRL DDGGDLKPKL HGCSVCGLEF SIGQALGGHM RRHRAMAAGG GRVVIAMMPP 120 AAAIEKHGGG DGAVVSMKRG LCLDLNHPPC DEYGASCEGD DECGHDAATA GYTFHQFLDI 180 GT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	1e-21	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG006470.3