PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG006480.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 164aa MW: 17740.6 Da PI: 8.3082

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG006480.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.9	0.00032	42	64	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+++F++ L H +H TRIDC1BG006480.2 42 FVCKTCDRVFPSFQALGGHRASH 64 89**********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 164 aa Download sequence
TKRFAFEEKE MVRMLLLVSR EQVMPMPMPM AVRGDRALER VFVCKTCDRV FPSFQALGGH 60 RASHKKPRLD DGGDLKPKLH GCSVCGLEFA IGQALGGHMR RHRAMAAGGG GGVMAMTPPA 120 AAIEKHGGGD GAVVGMKRRL WLDLNHPPCD EYGASCEGDD ECGH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	8e-21	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG006480.2