PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG006760.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 215aa    MW: 24218.1 Da    PI: 8.4829
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG006760.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.61.9e-1053100148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       +g+WT+ Ed +lv  v++lG ++W+  a+  g++  +k+c++rw +yl
  TRIDC1BG006760.2  53 KGPWTENEDAQLVWFVRLLGERRWDFLAQVSGLRGGGKSCRLRWVNYL 100
                       79******************************54468*********97 PP
2Myb_DNA-binding52.61.1e-16106151148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rgr T++E+ l++ +++++G++ W++Iar+++ gRt++++k++w++++
  TRIDC1BG006760.2 106 RGRITADEERLILSLHAEWGSR-WSRIARKLP-GRTDNEIKNYWRTHM 151
                       899*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
FSFSSFFRVI IWPESGTKPT TKTPGGGSSV HHIDRPAMCN NSGGRGGAMA ARKGPWTENE  60
DAQLVWFVRL LGERRWDFLA QVSGLRGGGK SCRLRWVNYL HPGLKRGRIT ADEERLILSL  120
HAEWGSRWSR IARKLPGRTD NEIKNYWRTH MRKKSSSAAT TEEAPQESTT SMDDEAEEEA  180
ATSASEEKKA EVVQYCSPVD MDQLWNDIAA SERYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.35e-55MYB family protein